BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C09SP1|AL428700
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1694 0.0
>3x_Contig1313
Length = 8010
Score = 1694 bits (853), Expect = 0.0
Identities = 858/861 (99%)
Strand = Plus / Minus
Query: 7 tcttgtttcctacatttttccacttatgtaatgagcatcttatgatttaaaagctccaca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5389 tcttgtttcctacatttttccacttatgtaatgagcatcttatgatttaaaagctccaca 5330
Query: 67 taaatttaactttttatgatacataattactttctttaatatcaagaccaaaaacgtata 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5329 taaatttaactttttatgatacataattactttctttaatatcaagaccaaaaacgtata 5270
Query: 127 gattcatggaattgttacaaccccaaacgctagcatgaaaataaatatgtactgtattta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5269 gattcatggaattgttacaaccccaaacgctagcatgaaaataaatatgtactgtattta 5210
Query: 187 tgctatacgagagcagtgaggggcattacaaattcctctcagtgggtttgagtttatcta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5209 tgctatacgagagcagtgaggggcattacaaattcctctcagtgggtttgagtttatcta 5150
Query: 247 ccccaatcatatcaaggatttcatattcgtccgcaacaggtatcaattgtccatccttgt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5149 ccccaatcatatcaaggatttcatattcgtccgcaacaggtatcaattgtccatccttgt 5090
Query: 307 atatcccatcgttacttagtacgtatcctttttgtttggcaattgtcctacattttttgt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5089 atatcccatcgttacttagtacgtatcctttttgtttggcaattgtcctacattttttgt 5030
Query: 367 tgaaattgttatyaccagtgaaatacacattagtggcaccgaggccttgatattcagcta 426
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 tgaaattgttattaccagtgaaatacacattagtggcaccgaggccttgatattcagcta 4970
Query: 427 ataagaaatcyactcggcggcaagttttaccaatatccattttatacttcttgtcgttcc 486
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4969 ataagaaatctactcggcggcaagttttaccaatatccattttatacttcttgtcgttcc 4910
Query: 487 cttttaaagttaaagcatctgcatctttgattctgtccggttcatatttggtgacagcag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 cttttaaagttaaagcatctgcatctttgattctgtccggttcatatttggtgacagcag 4850
Query: 547 caccgcaatagaacttgtgcactggttcatcgtaggctttgacgtcaaatggtttgttga 606
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4849 caccgcaatagaacttgtgcactggttcatcgtaagctttgacgtcaaatggtttgttga 4790
Query: 607 aatgagaaaataatttgtggaaccatggttggaacagactttttaaagtctcgttcaaat 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 aatgagaaaataatttgtggaaccatggttggaacagactttttaaagtctcgttcaaat 4730
Query: 667 tcaaaggacagatgatgtatcctgtttcagtcaatttaatgatgactttttccaattctc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 tcaaaggacagatgatgtatcctgtttcagtcaatttaatgatgactttttccaattctc 4670
Query: 727 gtgatatatagttcaaatcattttgccccggcatatgaactacaatgtcgatatcgccac 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 gtgatatatagttcaaatcattttgccccggcatatgaactacaatgtcgatatcgccac 4610
Query: 787 ttctgggttggccccgacgatatgatcccgttatctccatgcagaggttctcattaactt 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4609 ttctgggttggccccgacgatatgatcccgttatctccatgcagaggttctcattaactt 4550
Query: 847 cgttcattgctttccgtatta 867
|||||||||||||||||||||
Sbjct: 4549 cgttcattgctttccgtatta 4529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6741
Number of Sequences: 1807
Number of extensions: 6741
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)